L2L Microarray Analysis Tool
Results for N06A.profile.ud50
| Results summary | View all lists in GO:CellComp | View all genes in N06A.profile.ud50 |
| List Name | Description | Total probes |
Expected matches |
Actual matches |
Fold Enrichment |
Binomial p-value |
|---|---|---|---|---|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | 5251 | 25.96 | 52 | 2.00 | 4.17e-06 |
| intracellular membrane-bound organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. | 7804 | 38.58 | 66 | 1.71 | 3.55e-05 |
| membrane-bound organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. | 7809 | 38.61 | 66 | 1.71 | 3.62e-05 |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. | 194 | 0.96 | 7 | 7.30 | 5.93e-05 |
| membrane-enclosed lumen | The enclosed volume within a sealed membrane or between two sealed membranes. | 945 | 4.67 | 14 | 3.00 | 3.48e-04 |
| organelle lumen | The volume enclosed by the membranes of a particular organelle, e.g. endoplasmic reticulum lumen, or the space between the two lipid bilayers of a double membrane surrounding an organelle, e.g. nuclear membrane lumen. | 945 | 4.67 | 14 | 3.00 | 3.48e-04 |
| nuclear part | Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. | 1318 | 6.52 | 17 | 2.61 | 4.25e-04 |
| intracellular organelle | Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. | 8838 | 43.69 | 66 | 1.51 | 9.62e-04 |
| organelle | Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. | 8844 | 43.72 | 66 | 1.51 | 9.78e-04 |
| nuclear lumen | The volume enclosed by the nuclear inner membrane. | 771 | 3.81 | 11 | 2.89 | 1.91e-03 |
| intracellular | The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm. | 10805 | 53.42 | 76 | 1.42 | 2.04e-03 |
| intracellular part | Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm. | 10196 | 50.41 | 71 | 1.41 | 3.50e-03 |
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). | 922 | 4.56 | 11 | 2.41 | 7.15e-03 |
| perinuclear region of cytoplasm | Cytoplasm situated near, or occurring around, the nucleus. | 87 | 0.43 | 3 | 6.97 | 9.41e-03 |