L2L Microarray Analysis Tool
Results for N05A.profile.d50
| Results summary | View all lists in GO:BiolProc | View all genes in N05A.profile.d50 |
| List Name | Description | Total probes |
Expected matches |
Actual matches |
Fold Enrichment |
Binomial p-value |
|---|---|---|---|---|---|---|
| DNA replication | The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA. | 277 | 0.68 | 11 | 16.06 | 1.74e-10 |
| DNA metabolic process | The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides. | 922 | 2.28 | 14 | 6.14 | 1.32e-07 |
| DNA-dependent DNA replication | The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands. | 140 | 0.35 | 6 | 17.34 | 1.61e-06 |
| DNA replication initiation | The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action. | 44 | 0.11 | 4 | 36.78 | 4.68e-06 |
| cell cycle | The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division. | 1307 | 3.23 | 14 | 4.33 | 7.45e-06 |
| cell cycle process | A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. | 1144 | 2.83 | 13 | 4.60 | 8.41e-06 |
| regulation of progression through cell cycle | Any process that modulates the rate or extent of progression through the cell cycle. | 875 | 2.16 | 11 | 5.09 | 1.63e-05 |
| regulation of cell cycle | A cell cycle process that modulates the rate, extent or mode of the cell cycle. | 880 | 2.18 | 11 | 5.06 | 1.72e-05 |
| ribonucleoprotein complex biogenesis and assembly | The cellular process by which a complex containing RNA and proteins, is synthesized, aggregates, and bonds together. | 239 | 0.59 | 6 | 10.16 | 3.39e-05 |
| nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids. | 4320 | 10.68 | 26 | 2.43 | 5.00e-05 |
| ribosome biogenesis and assembly | The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis. | 89 | 0.22 | 4 | 18.18 | 7.71e-05 |
| RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. | 622 | 1.54 | 8 | 5.20 | 1.94e-04 |
| biopolymer metabolic process | The chemical reactions and pathways involving biopolymers, long, repeating chains of monomers found in nature e.g. polysaccharides and proteins. | 5812 | 14.37 | 29 | 2.02 | 4.39e-04 |
| rRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into a mature rRNA molecule. | 77 | 0.19 | 3 | 15.76 | 9.64e-04 |
| rRNA metabolic process | The chemical reactions and pathways involving rRNA, ribosomal RNA, a structural constituent of ribosomes. | 78 | 0.19 | 3 | 15.56 | 1.00e-03 |
| cellular metabolic process | The chemical reactions and pathways by which individual cells transform chemical substances. | 8889 | 21.97 | 38 | 1.73 | 1.17e-03 |
| primary metabolic process | Reactions involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism. | 8941 | 22.10 | 38 | 1.72 | 1.30e-03 |
| cell cycle phase | A cell cycle process comprising the steps by which a cell progresses through one of the biochemical and morphological phases and events that occur during successive cell replication or nuclear replication events. | 474 | 1.17 | 6 | 5.12 | 1.30e-03 |
| nucleic acid transport | The directed movement of nucleic acids, single or double-stranded polynucleotides involved in the storage, transmission and transfer of genetic information, into, out of, within or between cells. | 86 | 0.21 | 3 | 14.11 | 1.33e-03 |
| RNA transport | The directed movement of RNA, ribonucleic acids, into, out of, within or between cells. | 86 | 0.21 | 3 | 14.11 | 1.33e-03 |
| establishment of RNA localization | The directed movement of RNA to a specific location. | 86 | 0.21 | 3 | 14.11 | 1.33e-03 |
| macromolecule metabolic process | The chemical reactions and pathways involving macromolecules, large molecules including proteins, nucleic acids and carbohydrates. | 7752 | 19.16 | 34 | 1.77 | 1.36e-03 |
| RNA localization | A process by which RNA is transported to, or maintained in, a specific location. | 92 | 0.23 | 3 | 13.19 | 1.61e-03 |
| carboxylic acid metabolic process | The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-). | 679 | 1.68 | 7 | 4.17 | 1.72e-03 |
| organic acid metabolic process | The chemical reactions and pathways involving organic acids, any acidic compound containing carbon in covalent linkage. | 681 | 1.68 | 7 | 4.16 | 1.74e-03 |
| RNA splicing | The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA. | 347 | 0.86 | 5 | 5.83 | 1.87e-03 |
| nucleobase, nucleoside, nucleotide and nucleic acid transport | The directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of, within or between cells. | 99 | 0.24 | 3 | 12.26 | 1.98e-03 |
| mRNA catabolic process, nonsense-mediated decay | The nonsense-mediated mRNA decay pathway degrades mRNAs transcribed from genes in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins. | 30 | 0.07 | 2 | 26.97 | 2.54e-03 |
| mRNA processing | Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. | 382 | 0.94 | 5 | 5.30 | 2.83e-03 |
| metabolic process | Processes that cause many of the chemical changes in living organisms, including anabolism and catabolism. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation. | 9690 | 23.95 | 39 | 1.63 | 2.85e-03 |
| fatty acid beta-oxidation | The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A. | 32 | 0.08 | 2 | 25.28 | 2.88e-03 |
| mismatch repair | A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination. | 34 | 0.08 | 2 | 23.80 | 3.25e-03 |
| maintenance of fidelity during DNA-dependent DNA replication | The correction of errors made during DNA replication by either intrinsic DNA polymerase proofreading activity or via mismatch repair. | 35 | 0.09 | 2 | 23.12 | 3.44e-03 |
| mitotic cell cycle | Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, in which a cell is duplicated without changing ploidy; comprises four successive phases called G1, S, G2, and M. | 421 | 1.04 | 5 | 4.80 | 4.26e-03 |
| mRNA catabolic process | The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes. | 41 | 0.10 | 2 | 19.73 | 4.70e-03 |
| G1/S transition of mitotic cell cycle | Progression from G1 phase to S phase of the mitotic cell cycle. | 44 | 0.11 | 2 | 18.39 | 5.40e-03 |
| fatty acid oxidation | The removal of one or more electrons from a fatty acid, with or without the concomitant removal of a proton or protons, by reaction with an electron-accepting substance, by addition of oxygen or by removal of hydrogen. | 45 | 0.11 | 2 | 17.98 | 5.64e-03 |
| mRNA metabolic process | The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes. | 453 | 1.12 | 5 | 4.47 | 5.77e-03 |
| cell division | The processes resulting in the physical partitioning and separation of a cell into daughter cells. | 297 | 0.73 | 4 | 5.45 | 6.69e-03 |
| DNA recombination | The processes by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction. | 158 | 0.39 | 3 | 7.68 | 7.33e-03 |
| tRNA aminoacylation for protein translation | The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis. | 56 | 0.14 | 2 | 14.45 | 8.61e-03 |
| amino acid activation | The modification of an amino acid to an active form, for incorporation into a peptide, protein or other macromolecule. | 56 | 0.14 | 2 | 14.45 | 8.61e-03 |
| tRNA aminoacylation | The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules. | 56 | 0.14 | 2 | 14.45 | 8.61e-03 |
| DNA integration | The process by which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome. | 4 | 0.01 | 1 | 101.14 | 9.85e-03 |