L2L Microarray Analysis Tool
Results for D01A.profile.ud50
| Results summary | View all lists in GO:BiolProc | View all genes in D01A.profile.ud50 |
| List Name | Description | Total probes |
Expected matches |
Actual matches |
Fold Enrichment |
Binomial p-value |
|---|---|---|---|---|---|---|
| tRNA aminoacylation for protein translation | The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis. | 56 | 0.28 | 7 | 25.28 | 1.35e-08 |
| amino acid activation | The modification of an amino acid to an active form, for incorporation into a peptide, protein or other macromolecule. | 56 | 0.28 | 7 | 25.28 | 1.35e-08 |
| tRNA aminoacylation | The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules. | 56 | 0.28 | 7 | 25.28 | 1.35e-08 |
| cell cycle process | A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. | 1144 | 5.66 | 22 | 3.89 | 1.32e-07 |
| regulation of progression through cell cycle | Any process that modulates the rate or extent of progression through the cell cycle. | 875 | 4.33 | 18 | 4.16 | 6.77e-07 |
| amino acid transport | The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells. | 62 | 0.31 | 6 | 19.57 | 7.08e-07 |
| regulation of cell cycle | A cell cycle process that modulates the rate, extent or mode of the cell cycle. | 880 | 4.35 | 18 | 4.14 | 7.33e-07 |
| tRNA metabolic process | The chemical reactions and pathways involving tRNA, transfer RNA, a class of relatively small RNA molecules responsible for mediating the insertion of amino acids into the sequence of nascent polypeptide chains during protein synthesis. Transfer RNA is characterized by the presence of many unusual minor bases, the function of which has not been completely established. | 100 | 0.49 | 7 | 14.16 | 7.73e-07 |
| cell cycle | The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division. | 1307 | 6.46 | 22 | 3.40 | 1.18e-06 |
| amino acid metabolic process | The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents. | 344 | 1.70 | 11 | 6.47 | 1.63e-06 |
| M phase of mitotic cell cycle | Progression through M phase, the part of the mitotic cell cycle during which mitosis and cytokinesis take place. | 290 | 1.43 | 10 | 6.97 | 2.47e-06 |
| amino acid and derivative metabolic process | The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents, and compounds derived from amino acids. | 440 | 2.18 | 12 | 5.52 | 2.88e-06 |
| amine transport | The directed movement of amines, including polyamines, organic compounds containing one or more amino groups, into, out of, within or between cells. | 79 | 0.39 | 6 | 15.36 | 2.98e-06 |
| cell division | The processes resulting in the physical partitioning and separation of a cell into daughter cells. | 297 | 1.47 | 10 | 6.81 | 3.05e-06 |
| amine metabolic process | The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom. | 538 | 2.66 | 13 | 4.89 | 4.20e-06 |
| nitrogen compound metabolic process | The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium. | 580 | 2.87 | 13 | 4.53 | 9.33e-06 |
| organic acid transport | The directed movement of organic acids, any acidic compound containing carbon in covalent linkage, into, out of, within or between cells. | 97 | 0.48 | 6 | 12.51 | 9.82e-06 |
| carboxylic acid transport | The directed movement of carboxylic acids into, out of, within or between cells. Carboxylic acids are organic acids containing one or more carboxyl (COOH) groups or anions (COO-). | 97 | 0.48 | 6 | 12.51 | 9.82e-06 |
| mitosis | Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother. | 284 | 1.40 | 9 | 6.41 | 1.52e-05 |
| M phase | Progression through M phase, the part of the cell cycle comprising nuclear division and cytokinesis. | 375 | 1.85 | 10 | 5.39 | 2.29e-05 |
| carboxylic acid metabolic process | The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-). | 679 | 3.36 | 13 | 3.87 | 4.72e-05 |
| organic acid metabolic process | The chemical reactions and pathways involving organic acids, any acidic compound containing carbon in covalent linkage. | 681 | 3.37 | 13 | 3.86 | 4.86e-05 |
| mitotic cell cycle | Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, in which a cell is duplicated without changing ploidy; comprises four successive phases called G1, S, G2, and M. | 421 | 2.08 | 10 | 4.80 | 6.02e-05 |
| traversing start control point of mitotic cell cycle | Passage through a cell cycle control point late in G1 phase of the mitotic cell cycle just before entry into S phase; in most organisms studied, including budding yeast and animal cells, passage through start normally commits the cell to progressing through the entire cell cycle. | 19 | 0.09 | 3 | 31.94 | 1.10e-04 |
| neutral amino acid transport | The directed movement of neutral amino acids, amino acids with no net charge, into, out of, within or between cells. | 19 | 0.09 | 3 | 31.94 | 1.10e-04 |
| cell cycle phase | A cell cycle process comprising the steps by which a cell progresses through one of the biochemical and morphological phases and events that occur during successive cell replication or nuclear replication events. | 474 | 2.34 | 10 | 4.27 | 1.58e-04 |
| gluconeogenesis | The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol. | 31 | 0.15 | 3 | 19.57 | 4.90e-04 |
| DNA replication | The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA. | 277 | 1.37 | 7 | 5.11 | 5.21e-04 |
| pyruvate metabolic process | The chemical reactions and pathways involving pyruvate, 2-oxopropanoate. | 32 | 0.16 | 3 | 18.96 | 5.38e-04 |
| DNA-dependent DNA replication | The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands. | 140 | 0.69 | 5 | 7.22 | 7.09e-04 |
| G1 phase of mitotic cell cycle | Progression through G1 phase, one of two 'gap' phases in the mitotic cell cycle; G1 is the interval between the completion of mitosis and the beginning of DNA synthesis. | 36 | 0.18 | 3 | 16.86 | 7.64e-04 |
| regulation of DNA replication | Any process that modulates the frequency, rate or extent of DNA replication. | 38 | 0.19 | 3 | 15.97 | 8.96e-04 |
| hexose biosynthetic process | The chemical reactions and pathways resulting in the formation of hexose, any aldose with a chain of six carbon atoms in the molecule. | 39 | 0.19 | 3 | 15.56 | 9.67e-04 |
| alcohol biosynthetic process | The chemical reactions and pathways resulting in the formation of alcohols, any of a class of alkyl compounds containing a hydroxyl group. | 39 | 0.19 | 3 | 15.56 | 9.67e-04 |
| monosaccharide biosynthetic process | The chemical reactions and pathways resulting in the formation of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms. | 39 | 0.19 | 3 | 15.56 | 9.67e-04 |
| G1 phase | Progression through G1 phase, one of two 'gap' phases in the cell cycle; G1 is the interval between the completion of DNA segregation (usually by mitosis or meiosis) and the beginning of DNA synthesis. | 40 | 0.20 | 3 | 15.17 | 1.04e-03 |
| G2/M transition DNA damage checkpoint | A cell cycle checkpoint that blocks cell cycle progression from G2 to M phase in response to DNA damage. | 11 | 0.05 | 2 | 36.78 | 1.31e-03 |
| G2/M transition checkpoint | Any cell cycle checkpoint that blocks entry into M phase. | 11 | 0.05 | 2 | 36.78 | 1.31e-03 |
| macromolecule biosynthetic process | The chemical reactions and pathways resulting in the formation of macromolecules, large molecules including proteins, nucleic acids and carbohydrates. | 888 | 4.39 | 12 | 2.73 | 1.91e-03 |
| insulin receptor signaling pathway | The series of molecular signals generated as a consequence of the insulin receptor binding to insulin. | 51 | 0.25 | 3 | 11.90 | 2.11e-03 |
| cell cycle checkpoint | A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage. | 112 | 0.55 | 4 | 7.22 | 2.43e-03 |
| DNA metabolic process | The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides. | 922 | 4.56 | 12 | 2.63 | 2.59e-03 |
| regulation of progression through mitotic cell cycle | Any process that modulates the rate or extent of progress through the mitotic cell cycle. | 57 | 0.28 | 3 | 10.65 | 2.90e-03 |
| carbohydrate biosynthetic process | The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. | 120 | 0.59 | 4 | 6.74 | 3.11e-03 |
| dicarboxylic acid transport | The directed movement of dicarboxylic acids into, out of, within or between cells. | 19 | 0.09 | 2 | 21.29 | 3.95e-03 |
| nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids. | 4320 | 21.36 | 35 | 1.64 | 4.03e-03 |
| regulation of cyclin-dependent protein kinase activity | Any process that modulates the frequency, rate or extent of CDK activity. | 65 | 0.32 | 3 | 9.34 | 4.20e-03 |
| cell proliferation | The multiplication or reproduction of cells, resulting in the rapid expansion of a cell population. | 1154 | 5.71 | 13 | 2.28 | 5.84e-03 |
| G2/M transition of mitotic cell cycle | Progression from G2 phase to M phase of the mitotic cell cycle. | 26 | 0.13 | 2 | 15.56 | 7.34e-03 |
| regulation of DNA metabolic process | Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving DNA. | 80 | 0.40 | 3 | 7.59 | 7.48e-03 |
| negative regulation of progression through cell cycle | Any process that stops, prevents or reduces the frequency, rate or extent of progression through the cell cycle. | 347 | 1.72 | 6 | 3.50 | 8.16e-03 |
| response to unfolded protein | A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus. | 83 | 0.41 | 3 | 7.31 | 8.27e-03 |
| response to protein stimulus | A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus. | 83 | 0.41 | 3 | 7.31 | 8.27e-03 |
| heme metabolic process | The chemical reactions and pathways involving heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | 28 | 0.14 | 2 | 14.45 | 8.48e-03 |
| vasculogenesis | The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes. | 30 | 0.15 | 2 | 13.48 | 9.70e-03 |
| porphyrin metabolic process | The chemical reactions and pathways involving any member of a large group of derivatives or analogs of porphyrin. Porphyrins consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group. | 30 | 0.15 | 2 | 13.48 | 9.70e-03 |
| tetrapyrrole metabolic process | The chemical reactions and pathways involving tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next. | 30 | 0.15 | 2 | 13.48 | 9.70e-03 |