L2L L2L Microarray Analysis Tool

Results for C08E.profile.d50

Results summary View all lists in GO:BiolProc View all genes in C08E.profile.d50
List Name Description Total
probes
Expected
matches
Actual
matches
Fold
Enrichment
Binomial
p-value
DNA replication The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA. 277 0.68 10 14.60 2.91e-09
mRNA metabolic process The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes. 453 1.12 9 8.04 2.63e-06
DNA metabolic process The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides. 922 2.28 11 4.83 2.62e-05
DNA-dependent DNA replication The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands. 140 0.35 5 14.45 2.92e-05
RNA splicing The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA. 347 0.86 7 8.16 3.07e-05
RNA processing Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. 622 1.54 9 5.85 3.22e-05
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids. 4320 10.68 25 2.34 1.25e-04
RNA splicing, via transesterification reactions Splicing of RNA via a series of two transesterification reactions. 117 0.29 4 13.83 2.22e-04
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile Splicing of RNA via a series of two transesterification reactions with a bulged adenosine residue from the intron branch point as the initiating nucleophile. When the initial RNA for the splicing reaction is a single molecule (cis splicing), the excised intron is released in a lariat structure. 117 0.29 4 13.83 2.22e-04
nuclear mRNA splicing, via spliceosome The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. 117 0.29 4 13.83 2.22e-04
ribonucleoprotein complex biogenesis and assembly The cellular process by which a complex containing RNA and proteins, is synthesized, aggregates, and bonds together. 239 0.59 5 8.46 3.56e-04
mRNA processing Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. 382 0.94 6 6.35 4.29e-04
spliceosome assembly The aggregation and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions. 59 0.15 3 20.57 4.43e-04
protein-RNA complex assembly The aggregation and bonding together of proteins and RNA molecules to form a ribonucleoprotein complex. 154 0.38 4 10.51 6.26e-04
sulfur amino acid biosynthetic process The chemical reactions and pathways resulting in the formation of amino acids containing sulfur, comprising cysteine, methionine and selenocysteine. 17 0.04 2 47.59 8.11e-04
regulation of DNA recombination Any process that modulates the frequency, rate or extent of DNA recombination, a process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. 18 0.04 2 44.95 9.11e-04
regulation of DNA metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving DNA. 80 0.20 3 15.17 1.08e-03
regulation of mRNA stability Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs. 26 0.06 2 31.12 1.91e-03
regulation of RNA stability Any process that modulates the propensity of RNA molecules to degradation. Includes processes that both stabilize and destabilize RNAs. 27 0.07 2 29.97 2.06e-03
heterocycle metabolic process The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings). 102 0.25 3 11.90 2.16e-03
sulfur amino acid metabolic process The chemical reactions and pathways involving amino acids containing sulfur, comprising cysteine, homocysteine, methionine and selenocysteine. 28 0.07 2 28.90 2.21e-03
negative regulation of DNA metabolic process Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways involving DNA. 28 0.07 2 28.90 2.21e-03
somatic recombination of immunoglobulin genes during immune response The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, also known as immunoglobulin gene segments, within a single locus following the induction of an immune response. 30 0.07 2 26.97 2.54e-03
somatic diversification of immunoglobulins during immune response The somatic process by means of which sequence diversity of immunoglobulins is generated after the induction of an immune response. 30 0.07 2 26.97 2.54e-03
immunoglobulin production during immune response The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus during an immune response, resulting in an increase in its intracellular or extracellular levels. 30 0.07 2 26.97 2.54e-03
isotype switching The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus. 30 0.07 2 26.97 2.54e-03
somatic diversification of immune receptors via germline recombination within a single locus The process by which immune receptor genes are diversified through recombination of the germline genetic elements within a single genetic locus. 31 0.08 2 26.10 2.71e-03
somatic cell DNA recombination Recombination occurring within or between DNA molecules in somatic cells. 31 0.08 2 26.10 2.71e-03
somatic recombination of immunoglobulin gene segments The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus. 31 0.08 2 26.10 2.71e-03
response to UV A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers. 32 0.08 2 25.28 2.88e-03
somatic diversification of immune receptors The somatic process allowing for the production of immune receptors whose specificity is not encoded in the germline genomic sequences. 34 0.08 2 23.80 3.25e-03
mismatch repair A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination. 34 0.08 2 23.80 3.25e-03
somatic diversification of immunoglobulins The somatic process by means of which sequence diversity of immunoglobulins is generated. 34 0.08 2 23.80 3.25e-03
aging The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility. 35 0.09 2 23.12 3.44e-03
maintenance of fidelity during DNA-dependent DNA replication The correction of errors made during DNA replication by either intrinsic DNA polymerase proofreading activity or via mismatch repair. 35 0.09 2 23.12 3.44e-03
regulation of RNA metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving RNA. 35 0.09 2 23.12 3.44e-03
biopolymer metabolic process The chemical reactions and pathways involving biopolymers, long, repeating chains of monomers found in nature e.g. polysaccharides and proteins. 5812 14.37 26 1.81 3.59e-03
DNA damage response, signal transduction resulting in induction of apoptosis A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death). 36 0.09 2 22.47 3.64e-03
immunoglobulin production The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. 39 0.10 2 20.75 4.26e-03
cellular component assembly A cellular process that results in the assembly of a part of the cell. 811 2.00 7 3.49 4.53e-03
base-excision repair In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. 41 0.10 2 19.73 4.70e-03
G1/S transition of mitotic cell cycle Progression from G1 phase to S phase of the mitotic cell cycle. 44 0.11 2 18.39 5.40e-03
DNA replication initiation The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action. 44 0.11 2 18.39 5.40e-03
sulfur compound biosynthetic process The chemical reactions and pathways resulting in the formation of compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione. 49 0.12 2 16.51 6.65e-03
production of molecular mediator of immune response The synthesis or release of any molecular mediator of the immune response following an immunological stimulus, resulting in an increase in its intracellular or extracellular levels. 51 0.13 2 15.86 7.19e-03
aromatic compound metabolic process The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons. 159 0.39 3 7.63 7.45e-03
amino acid biosynthetic process The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents. 56 0.14 2 14.45 8.61e-03
induction of apoptosis by intracellular signals Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis. 59 0.15 2 13.71 9.52e-03

Raw data (tab-delimited .txt)